PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_08124.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 387aa    MW: 41938.4 Da    PI: 9.234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_08124.1_g00002.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.51.3e-17261323163
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                              e+e+kr+rrkq NReAA rsR+RK+ae +eL++  ++L aeN +L+ e+++lk + ++l+se+
  Rsa1.0_08124.1_g00002.1 261 EREVKRQRRKQTNREAAERSRLRKQAEFDELAKHTEVLNAENASLRAEMNRLKRQREELTSEN 323
                              799**********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.0E-24897IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.6E-19138256No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-12256320No hitNo description
SMARTSM003382.0E-14261325IPR004827Basic-leucine zipper domain
PfamPF001702.5E-15261323IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.863263326IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-9264320No hitNo description
CDDcd147026.05E-16266315No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MEKSSTEKEP KQPSSSAAPP SSQEPTSAVS AGMATPDWSG FQAYSPMPPH GFVASSPQPH  60
PYMWGPQHMM MPPYGTPPHP YVKMYLPGGM YPHPSMPPGS YPYSPYAMPS PKNGMTKASG  120
HSSGGGTEGD SKRSAVKEKL PIRRSERILN MKTGKNNGTG ENSETSANEA YSKRHVGESA  180
SDGLSEGSDA NYQNDSGSEQ DSKDASSESG GSANGPRNGS AGSSTPLPPV SQNVPVMPKT  240
AAGAPTSAPI PGMNRKVYQD EREVKRQRRK QTNREAAERS RLRKQAEFDE LAKHTEVLNA  300
ENASLRAEMN RLKRQREELT SENNSLKLQL LSFPPLEGIN IKIEKDDQEP DTYQTDFTET  360
KGQGPVGRSS GLVAEANLRH RLRQISV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006410711.11e-162hypothetical protein EUTSA_v10016740mg
SwissprotQ501B21e-159BZP16_ARATH; bZIP transcription factor 16
TrEMBLV4M7991e-162V4M799_EUTSA; Uncharacterized protein
STRINGAT2G35530.11e-157(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM37012557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-131basic region/leucine zipper transcription factor 16